Motif View

Internal ID 19057690
Source Database TransTermHP TERM 449
Feature Type terminator
Name
Rho-independent transcription terminator TERM 449
Sequence CGCCGGCAAGCCGGCG
Look for more occurrences
Start 2269965
End 2269980
Strand +
Genomic Context
Replicon Pseudomonas sp. MT-1.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCGGGAATAAAAAA(5' tail) CGCCGG(5' stem) CAAG(loop) CCGGCG(3' stem) TTTTTTCGATTCTGA(3' tail). Confidence: 100. opp_overlap 2269965

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685