Motif View

Internal ID 19057635
Source Database TransTermHP TERM 368
Feature Type terminator
Name
Rho-independent transcription terminator TERM 368
Sequence GCCCCGCAAATGCGGGGC
Look for more occurrences
Start 1876723
End 1876740
Strand -
Genomic Context
Replicon Pseudomonas sp. MT-1.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATCAACAATAAAAAA(5' tail) GCCCCGC(5' stem) ATTT(loop) GCGGGGC(3' stem) CTTTTACATTTGCTT(3' tail). Confidence: 100. opp_overlap 1876722 1876723

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685