Motif View

Internal ID 19057364
Source Database TransTermHP TERM 1704
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1704
Sequence GGAGCCGCCAGGCTCC
Look for more occurrences
Start 6758599
End 6758614
Strand +
Genomic Context
Replicon Pseudomonas sp. MRSN12121, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATGACCCAGTAAAAA(5' tail) GGAGCC(5' stem) GCCA(loop) GGCTCC(3' stem) TTTTCTTTATCCGGG(3' tail). Confidence: 100. opp_overlap 6758599, overlap 6758594

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685