Motif View

Internal ID 19056720
Source Database TransTermHP TERM 765
Feature Type terminator
Name
Rho-independent transcription terminator TERM 765
Sequence CGCGACAGGCGACTGTCGCG
Look for more occurrences
Start 2892468
End 2892487
Strand +
Genomic Context
Replicon Pseudomonas sp. MRSN12121, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCAACCCACACACAA(5' tail) CGCGACAG(5' stem) GCGA(loop) CTGTCGCG(3' stem) TTTTTTTTCGTGGGT(3' tail). Confidence: 100. opp_overlap 2892468

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685