Motif View

Internal ID 19049735
Source Database TransTermHP TERM 18
Feature Type terminator
Name
Rho-independent transcription terminator TERM 18
Sequence GGGCGCCTTGGCGGGCGCCC
Look for more occurrences
Start 43405
End 43424
Strand +
Genomic Context
Replicon Pseudomonas sp. FGI182, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGGTATTTAGGGAGG(5' tail) GGGCGCCT(5' stem) TGGC(loop) GGGCGCCC(3' stem) TTTCTGATTTCATCT(3' tail). Confidence: 93. overlap 43401

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685