| Internal ID | 19047437 | Source Database | TransTermHP TERM 20 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 20
|
| Sequence |
CAGGCAATAAAAAACCCATGATTGCTCATGGGTTTTTTATTGCCAA Look for more occurrences |
| Start | 44995 |
| End | 45040 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas sp. DSM 29166 5_405642_36.1683, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CTCCCGACTGATTAA(5' tail) TTGGCAATAAAAAACCCATGA(5' stem) GCAA(loop) TCATGGGTTTTTTATTGCCTG(3' stem) CGTTTTACAGCGGGG(3' tail). Confidence: 100. opp_overlap 44994 44993 44997 45009, overlap 44996 45009 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|