| Internal ID | 19047435 | Source Database | TransTermHP TERM 18 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 18
|
| Sequence |
AATTGGCAATAAAAAACCCATGAGCAATCATGGGTTTTTTATTGCCTGCG Look for more occurrences |
| Start | 44993 |
| End | 45042 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. DSM 29166 5_405642_36.1683, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AGCTCCCGACTGATT(5' tail) AATTGGCAATAAAAAACCCATGA(5' stem) GCAA(loop) TCATGGGTTTTTTATTGCCTGCG(3' stem) TTTTACAGCGGGGTG(3' tail). Confidence: 100. opp_overlap 44995 44996 45009, overlap 44994 44997 45009 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|