| Internal ID | 19046750 | Source Database | TransTermHP TERM 17 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 17
|
| Sequence |
CCCCATGCCTGCAGGCACTGAAGCAGGTTGCGGCAGCGCCTACAGGAAGGGTG Look for more occurrences |
| Start | 51599 |
| End | 51651 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. DSM 29166 12_133928_36.2809, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TTCGCCTCAAGCTGA(5' tail) CCCCATGCCTGCAGGCACTGAAGCA(5' stem) GGT(loop) TGCGGCAGCGCCTACAGGAAGGGTG(3' stem) TTTTTATAAACATCC(3' tail). Confidence: 93. opp_overlap 51647, overlap 51601 51647 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|