| Internal ID | 19046484 | Source Database | TransTermHP TERM 18 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 18
|
| Sequence |
GCGCTTAACACCAAAAACCTCCTGCCCGGAGGCTTTTGGTGTTAAGGGG Look for more occurrences |
| Start | 25154 |
| End | 25202 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas sp. DSM 29165 7_312052_35.1048, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GGCTTGCTCCACAAC(5' tail) CCCCTTAACACCAAAAGCCTCC(5' stem) GGGCA(loop) GGAGGTTTTTGGTGTTAAGCGC(3' stem) TGACGATTACAAGTC(3' tail). Confidence: 100. opp_overlap 25164 25171, overlap 25153 25170 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|