| Internal ID | 19039670 | Source Database | TransTermHP TERM 111 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 111
|
| Sequence |
CGCAAAAGGCCCGCCATCCGGCGGGCCTTTTCG Look for more occurrences |
| Start | 339523 |
| End | 339555 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. AAC Scaffold8, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GTGATCCAGCGCCAG(5' tail) CGCAAAAGGCCCGCC(5' stem) ATCC(loop) GGCGGGCCTTTT-CG(3' stem) TTTGTGCAGCCTTCG(3' tail). Confidence: 100. gap 1, opp_overlap 339530, overlap 339530 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|