| Internal ID | 19023549 | Source Database | TransTermHP TERM 13 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 13
|
| Sequence |
CACAAAGGCCGGCAGCGAAAGTTGCCGGCCTTTTTG Look for more occurrences |
| Start | 88473 |
| End | 88508 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas putida KG-4 contig00005, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GCCGGCACAGGCAAA(5' tail) CAAAAAGGCCGGCAAC(5' stem) TTTC(loop) GCTGCCGGCCTTTGTG(3' stem) CTTACTTCGCCTGGT(3' tail). Confidence: 100. opp_overlap 88473 88479, overlap 88479 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|