| Internal ID | 19012234 | Source Database | TransTermHP TERM 1402 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1402
|
| Sequence |
CCCGCTCCCACAGGCACACCGCCAGGCTTGAATCCAGCGGAGCACCTGTGGGAGCGGG Look for more occurrences |
| Start | 5179606 |
| End | 5179663 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas plecoglossicida strain NyZ12, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CTCTTCGCGGGTAAA(5' tail) CCCGCTCCCACAGGCACACCGCCAGGCT(5' stem) TGA(loop) ATCCAG-CGGAGCACCTGTGGGAGCGGG(3' stem) TTTACCCGCGAAGAG(3' tail). Confidence: 100. gap 1, opp_overlap 5179606, overlap 5179653 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|