| Internal ID | 19010068 | Source Database | TransTermHP TERM 21 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 21
|
| Sequence |
CTGCAGCCAAAGAAAGCCCGCTTTCGCGGGCTTTCTTTCGAGCGG Look for more occurrences |
| Start | 109450 |
| End | 109494 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 strain NBRC 103162, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GTAGCCCGTGTGGAT(5' tail) CTGCAGCCAAAGAAAGCCCGC(5' stem) TTTC(loop) GCGGGCTTTCTTTCGA-GCGG(3' stem) TTTCTACACCTGATC(3' tail). Confidence: 95. gap 1, opp_overlap 109461 109465, overlap 109461 109465 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|