Motif View

Internal ID 19009022
Source Database TransTermHP TERM 242
Feature Type terminator
Name
Rho-independent transcription terminator TERM 242
Sequence GCCCGCCTCATGGCGGGC
Look for more occurrences
Start 1102805
End 1102822
Strand +
Genomic Context
Replicon Pseudomonas parafulva strain CRS01-1, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCGATGTCTAGCCAG(5' tail) GCCCGCC(5' stem) TCAT(loop) GGCGGGC(3' stem) TTTCTTCATCCTGAG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685