| Internal ID | 19008403 | Source Database | TransTermHP TERM 1 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1
|
| Sequence |
GGCCGGCAACCAGGGTTGCCGGCC Look for more occurrences |
| Start | 12908 |
| End | 12931 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas parafulva NBRC 16636 = DSM 17004 strain NBRC 16636, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AAATAAAGTACTTCA(5' tail) GGCCGGCAAC(5' stem) CAGG(loop) GTTGCCGGCC(3' stem) TTTTTCGTTGCAGGT(3' tail). Confidence: 100. opp_overlap 12904 12903 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|