| Internal ID | 19006853 | Source Database | TransTermHP TERM 569 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 569
|
| Sequence |
CGAGGCAGCCGCGACCGGGCCGGAGAAAAAACTTTTCCGGTTTGCCGCGGCTTCCTCG Look for more occurrences |
| Start | 2049477 |
| End | 2049534 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TTCATCTCATTAAGA(5' tail) CGAGGAAGCCGCG-GCAAACCGGAAAA(5' stem) GTTTT(loop) TTCTCCGGCCCGGTCGCGGCTGCCTCG(3' stem) ATCAAGCGGTTTGCA(3' tail). Confidence: 100. gap 1, opp_overlap 2049513, overlap 2049475 2049484 2049495 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|