| Internal ID | 18999910 | Source Database | TransTermHP TERM 2 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 2
|
| Sequence |
GCCCTGGCGGCTGGCGTGTGCCAGCGCCTGGGC Look for more occurrences |
| Start | 21905 |
| End | 21937 |
| Strand | + |
| Genomic Context | Located within gene [N005_RS00665] |
| Replicon | Pseudomonas mediterranea CFBP 5447 scaffold4, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CGGCCTGCTGAATCA(5' tail) GCCCTGGCGGCTGGC(5' stem) GTGT(loop) GCCAGC-GCCTGGGC(3' stem) ATTTTGCAGGCGGCG(3' tail). Confidence: 100. gap 1, opp_overlap 21886 21905, overlap 21904 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|