| Internal ID | 18998888 | Source Database | TransTermHP TERM 64 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 64
|
| Sequence |
TCGCAGCCTTCGGCAGCTCCTACATTGGGCTTGTGTAGGAGCTGCCGAAGGCTGCGATC Look for more occurrences |
| Start | 218439 |
| End | 218497 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas lini strain DSM 16768 8_312049_22.9628, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CGCAAAATCAAAAGA(5' tail) --TCGCAGCCTTCGGCAGCTCCTACAT(5' stem) TGGGCTT(loop) GTGTAGGAGCTGCCGAAGGCTGCGATC(3' stem) TTTTGATCTTTCTGC(3' tail). Confidence: 100. gap 2, opp_overlap 218437 218439, overlap 218439 218494 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|