Internal ID | 18998143 | Source Database | TransTermHP TERM 87 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 87
|
Sequence |
GCCCACCGATTGGTGGGC Look for more occurrences |
Start | 264941 |
End | 264958 |
Strand | - |
Genomic Context | |
Replicon | Pseudomonas lini strain DSM 16768 2_928492_19.6844, whole genome shotgun sequence. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | CGCAGCCAACAAAAA(5' tail) GCCCACC(5' stem) AATC(loop) GGTGGGC(3' stem) TTCGTGTTTACCGCG(3' tail). Confidence: 100. opp_overlap 264941 264935, overlap 264935 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|