Motif View

Internal ID 18996740
Source Database TransTermHP TERM 459
Feature Type terminator
Name
Rho-independent transcription terminator TERM 459
Sequence GGGCGGTGTTCACCGCCC
Look for more occurrences
Start 1463250
End 1463267
Strand +
Genomic Context
Replicon Pseudomonas knackmussii B13 complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCTAGGACGGAAAA(5' tail) GGGCGGT(5' stem) GTTC(loop) ACCGCCC(3' stem) TTTTTCATGCCCGTG(3' tail). Confidence: 100. opp_overlap 1463250

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685