Motif View

Internal ID 18989899
Source Database TransTermHP TERM 37
Feature Type terminator
Name
Rho-independent transcription terminator TERM 37
Sequence GGCGATCCAGAAGGATCGCC
Look for more occurrences
Start 174643
End 174662
Strand -
Genomic Context
Replicon Pseudomonas fluorescens strain AU11114 Contig_62, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTTGGGCACAAAAAA(5' tail) GGCGATCC(5' stem) TTCT(loop) GGATCGCC(3' stem) TTTTTTATTGGGTTC(3' tail). Confidence: 100. opp_overlap 174643

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685