| Internal ID | 18988466 | Source Database | TransTermHP TERM 66 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 66
|
| Sequence |
GATCGCAGGCTTCGCCAGCTCCTACACATTCCTTGCAGGAGCTGCCGCAGGCTGCGATC Look for more occurrences |
| Start | 301780 |
| End | 301838 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas fluorescens strain AU5633 Contig_51, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | ATGGCTGAAGCAAAA(5' tail) GATCGCAGCCTGCGGCAGCTCCTGCA(5' stem) AGGAATG(loop) TGTAGGAGCTGGCGAAGCCTGCGATC(3' stem) TGTTTACAGCGGTGC(3' tail). Confidence: 100. opp_overlap 301780 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|