Motif View

Internal ID 18984274
Source Database TransTermHP TERM 184
Feature Type terminator
Name
Rho-independent transcription terminator TERM 184
Sequence TGACCCTGCGCTTACCCGGCGCGGGGTCA
Look for more occurrences
Start 555086
End 555114
Strand -
Genomic Context
Replicon Pseudomonas fluorescens strain AU11122 Contig_38, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGGAACTACAGACA(5' tail) TGACCCCGCGCC(5' stem) GGGTA(loop) AGCGCAGGGTCA(3' stem) CACAGGTGGGTGCAA(3' tail). Confidence: 91.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685