| Internal ID | 18980153 | Source Database | TransTermHP TERM 102 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 102
|
| Sequence |
TATGCAGCGAAGCTGCCTTCGCGGCTCGCTGCATG Look for more occurrences |
| Start | 493135 |
| End | 493169 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas fluorescens strain AU12644 Contig_53, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CTGCCTTAAACCTGA(5' tail) TATGCAGCGAAGCTGC(5' stem) CTTC(loop) GCGGCT-CGCTGCATG(3' stem) TTTCTCGCCTCATTA(3' tail). Confidence: 93. gap 1, opp_overlap 493146, overlap 493137 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|