| Internal ID | 18979472 | Source Database | TransTermHP TERM 17 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 17
|
| Sequence |
CCGCGCATGCTCCCCCCAGCGTGCGCGG Look for more occurrences |
| Start | 80869 |
| End | 80896 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas fluorescens strain AU11164 Contig_49, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CAGGACGCCGTTGTG(5' tail) CCGCGCATGCT(5' stem) CCCCCC(loop) AGCGTGCGCGG(3' stem) TTTTGTTGGTTCATC(3' tail). Confidence: 100. opp_overlap 80859 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|