Motif View

Internal ID 18978281
Source Database TransTermHP TERM 37
Feature Type terminator
Name
Rho-independent transcription terminator TERM 37
Sequence CCCGTCACGGTCAACCGGACGGG
Look for more occurrences
Start 153521
End 153543
Strand +
Genomic Context
Replicon Pseudomonas fluorescens strain AU11235 Contig_37, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGCATCATCGTTCAA(5' tail) CCCGTCACGG(5' stem) TCAA(loop) CCG-GACGGG(3' stem) TTTGTTTGTTTCTGG(3' tail). Confidence: 100. gap 1

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685