Motif View

Internal ID 18976023
Source Database TransTermHP TERM 69
Feature Type terminator
Name
Rho-independent transcription terminator TERM 69
Sequence CGCGAGGCTGCCGATGGAGGCAGCCTCGCG
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Start 185181
End 185210
Strand +
Genomic Context
Replicon Pseudomonas fluorescens strain AU10414 Contig_11, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCTGAGCTAACCACA(5' tail) CGCGAGGCTGCC(5' stem) GATGGA(loop) GGCAGCCTCGCG(3' stem) TTTTTGTTGGTCGTG(3' tail). Confidence: 100. opp_overlap 185181 185176

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685