Motif View

Internal ID 18970523
Source Database TransTermHP TERM 241
Feature Type terminator
Name
Rho-independent transcription terminator TERM 241
Sequence CGCGGCGCCCTCACAGGTGCCGCG
Look for more occurrences
Start 762530
End 762553
Strand -
Genomic Context
Replicon Pseudomonas fluorescens strain C3 FCC4LTTACXX-wHAIPI007897-94_L5_1_(paired)_contig_2, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCACCATAAAAAAA(5' tail) CGCGGCACC(5' stem) TGTGAG(loop) GGCGCCGCG(3' stem) TTTTTTGTGCCTGCT(3' tail). Confidence: 100. opp_overlap 762530

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685