| Internal ID | 18970272 | Source Database | TransTermHP TERM 18 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 18
|
| Sequence |
AATGAAGGCCGCACCCCGCAAAGGGTCGCGGCCTTCAGC Look for more occurrences |
| Start | 96639 |
| End | 96677 |
| Strand | - |
| Genomic Context | Located within gene [VC34_RS14515] |
| Replicon | Pseudomonas fluorescens strain C3 FCC4LTTACXX-wHAIPI007897-94_L5_1_(paired)_contig_17, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AACAAGCCCCAAAAA(5' tail) GCTGAAGGCCGCGACCC(5' stem) TTTGCG(loop) GGGT-GCGGCCTTCATT(3' stem) TCCTGGTTCAAGCAT(3' tail). Confidence: 91. gap 1, opp_overlap 96641, overlap 96640 96641 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|