Internal ID | 18969897 | Source Database | TransTermHP TERM 3 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 3
|
Sequence |
GACCCGGCTCTTGCCGGGTC Look for more occurrences |
Start | 13164 |
End | 13183 |
Strand | + |
Genomic Context | |
Replicon | Pseudomonas fluorescens strain C1 FCC4LTTACXX-wHAIPI007895-92_L5_1_(paired)_contig_7, whole genome shotgun sequence. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | TAATCACGGTTATTT(5' tail) GACCCGGC(5' stem) TCTT(loop) GCCGGGTC(3' stem) TTTTTTTGCCTGTGA(3' tail). Confidence: 100. |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
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