| Internal ID | 18969805 | Source Database | TransTermHP TERM 117 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 117
|
| Sequence |
GGGCGCCAGCCGGCGCTC Look for more occurrences |
| Start | 578598 |
| End | 578615 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas fluorescens strain C1 FCC4LTTACXX-wHAIPI007895-92_L5_1_(paired)_contig_4, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TCATCAAGTAACAAA(5' tail) GAGCGCC(5' stem) GGCT(loop) GGCGCCC(3' stem) TGTTGAAGGGGCGCC(3' tail). Confidence: 93. opp_overlap 578598 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|