Motif View

Internal ID 18967507
Source Database TransTermHP TERM 781
Feature Type terminator
Name
Rho-independent transcription terminator TERM 781
Sequence GCCCTGACGTGTTCAGGGC
Look for more occurrences
Start 3196874
End 3196892
Strand -
Genomic Context
Replicon Pseudomonas fluorescens PICF7, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACCGGGCATAAAAAA(5' tail) GCCCTGA(5' stem) ACACG(loop) TCAGGGC(3' stem) TTCATAGGGTTGCTG(3' tail). Confidence: 100. opp_overlap 3196874, overlap 3196860

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685