| Internal ID | 18965798 | Source Database | TransTermHP TERM 1173 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1173
|
| Sequence |
CACTGCATAACCAATGTGGGAGCGGCGCACCGCCGCTCCCACATTTGGTTTTGCGTG Look for more occurrences |
| Start | 5446546 |
| End | 5446602 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas fluorescens strain PCL1751, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | ACAAGTTCTAAGCAA(5' tail) CACTGCATAACC-AATGTGGGAGCGGCG(5' stem) CAC(loop) CGCCGCTCCCACATTTGGTTTTGC-GTG(3' stem) TATTCAGCTGTGGCG(3' tail). Confidence: 100. opp_overlap 5446546 5446556 5446560, overlap 5446549 5446556 5446556 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|