Motif View

Internal ID 18965276
Source Database TransTermHP TERM 435
Feature Type terminator
Name
Rho-independent transcription terminator TERM 435
Sequence GCCGATCCATTTATGGGTCGGC
Look for more occurrences
Start 1862320
End 1862341
Strand -
Genomic Context
Replicon Pseudomonas fluorescens strain PCL1751, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCAGGCAATAAAAAA(5' tail) GCCGACCCA(5' stem) TAAA(loop) TGGATCGGC(3' stem) TTGATAACAACCCCG(3' tail). Confidence: 100. opp_overlap 1862320

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685