Motif View

Internal ID 18954790
Source Database TransTermHP TERM 265
Feature Type terminator
Name
Rho-independent transcription terminator TERM 265
Sequence CCCCATGAGCGATCATGGGG
Look for more occurrences
Start 1606040
End 1606059
Strand -
Genomic Context
Replicon Pseudomonas fluorescens PA4C2 scaffold1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCGAGCATAAAAAAA(5' tail) CCCCATGA(5' stem) TCGC(loop) TCATGGGG(3' stem) TTTTTCATTTTCAGC(3' tail). Confidence: 100. opp_overlap 1606040

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685