| Internal ID | 18936320 | Source Database | TransTermHP TERM 9 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 9
|
| Sequence |
AGGAAAAGCCCCGTAGCTGAAAAGCAACGGGGCTTTTTCG Look for more occurrences |
| Start | 20530 |
| End | 20569 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas deceptionensis strain DSM 26521 6_394563_31.1172, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GCTGAAAAATCACAT(5' tail) AGGAAAAGCCCCGTAGCT(5' stem) GAAA(loop) AGCAACGGGGCTTTTTCG(3' stem) TTTCTGATTTTCGAT(3' tail). Confidence: 100. opp_overlap 20524 20531 20537, overlap 20531 20537 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|