| Internal ID | 18936134 | Source Database | TransTermHP TERM 145 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 145
|
| Sequence |
CTTGCGTAGCGGCGGCCTAAGGAACGCAGCCTCGTTCCTTCGGCCGCCGCTACGAAAC Look for more occurrences |
| Start | 502853 |
| End | 502910 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas deceptionensis strain DSM 26521 3_551948_49.6358, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AGCAGTAACCCCTCG(5' tail) CTTGCGTAGCGGCGGCCTAAGGAACG(5' stem) CAGCCT(loop) CGTTCCTTCGGCCGCCGCTACGAAAC(3' stem) TCTCTCAGCCATTCA(3' tail). Confidence: 100. opp_overlap 502846 502847 502878 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|