Motif View

Internal ID 18933849
Source Database TransTermHP TERM 1426
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1426
Sequence CGTCGATAGCCTGAACGGGTTATCGACG
Look for more occurrences
Start 5715236
End 5715263
Strand -
Genomic Context
Replicon Pseudomonas cichorii JBC1, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACGCGAAAACCAAAA(5' tail) CGTCGATAACCC(5' stem) GTTC(loop) AGGCTATCGACG(3' stem) CAAGTGGCAAGGACT(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685