| Internal ID | 18933416 | Source Database | TransTermHP TERM 825 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 825
|
| Sequence |
TGAAAAGGCCGACCCGTTCGCACGGGTCGGCCTTTTTA Look for more occurrences |
| Start | 3598177 |
| End | 3598214 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas cichorii JBC1, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | ATCCCTCGGGGTTAT(5' tail) TGAAAAGGCCGACCCGT(5' stem) TCGC(loop) ACGGGTCGGCCTTTTTA(3' stem) TTGCCTGCGATTCAG(3' tail). Confidence: 100. opp_overlap 3598183, overlap 3598183 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|