| Internal ID | 18933231 | Source Database | TransTermHP TERM 551 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 551
|
| Sequence |
AAAAAAACCCTGCCGAAGCAGGGTTTTTTG Look for more occurrences |
| Start | 2040561 |
| End | 2040590 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas cichorii JBC1, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CGCTCCTGTAAGCCA(5' tail) AAAAAAACCCTGC(5' stem) CGAA(loop) GCAGGGTTTTTTG(3' stem) TTTATTACCGATCAG(3' tail). Confidence: 95. opp_overlap 2040568, overlap 2040568 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|