Motif View

Internal ID 18932519
Source Database TransTermHP TERM 786
Feature Type terminator
Name
Rho-independent transcription terminator TERM 786
Sequence GCCGACCCATTCATGGGTCGGC
Look for more occurrences
Start 3623446
End 3623467
Strand +
Genomic Context
Replicon Pseudomonas chlororaphis strain UFB2, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGGATTGTTATCGA(5' tail) GCCGACCCA(5' stem) TTCA(loop) TGGGTCGGC(3' stem) TTTTTATTGCCCGGT(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685