| Internal ID | 18932046 | Source Database | TransTermHP TERM 48 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 48
|
| Sequence |
CCAAGAAAAGCGCCCGGCCTTCTGGTCGGGCTTTTTTTTGG Look for more occurrences |
| Start | 462507 |
| End | 462547 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas chlororaphis strain UFB2, complete genome. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CGATAAGTAAGATTG(5' tail) CCAAGAAAAGCGCCCGGCC(5' stem) TTCT(loop) GGTCGGGC-TTTTTTTTGG(3' stem) GTTTTTTTTAATCGA(3' tail). Confidence: 100. gap 1, opp_overlap 462516 462517 462518, overlap 462518 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|