Motif View

Internal ID 18931426
Source Database TransTermHP TERM 795
Feature Type terminator
Name
Rho-independent transcription terminator TERM 795
Sequence GCCCCGTGTTCTCATTCGGTCACGGGGC
Look for more occurrences
Start 2975757
End 2975784
Strand -
Genomic Context
Replicon Pseudomonas chlororaphis strain PCL1606, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCGGATGAAAAAAA(5' tail) GCCCCGTGACC(5' stem) GAATGA(loop) GAACACGGGGC(3' stem) AAAGGATTTGGTTGG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685