| Internal ID | 18930619 | Source Database | TransTermHP TERM 150 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 150
|
| Sequence |
CAACCCGGCCGCGCGCTGTGGCGGTCGGGTTG Look for more occurrences |
| Start | 560527 |
| End | 560558 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas chlororaphis subsp. aureofaciens NBRC 3521, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CCCGGAGAGGTTAAA(5' tail) CAACCCGACCGCCAC(5' stem) AGC(loop) GCG-CGGCCGGGTTG(3' stem) TTTCAAAGCGTGGCC(3' tail). Confidence: 95. gap 1, opp_overlap 560527 560530, overlap 560530 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|