Motif View

Internal ID 18925816
Source Database TransTermHP TERM 96
Feature Type terminator
Name
Rho-independent transcription terminator TERM 96
Sequence GCCCGGCCTTCTGGTCGGGC
Look for more occurrences
Start 444691
End 444710
Strand -
Genomic Context
Replicon Pseudomonas brassicacearum PP1_210F scaffold1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AAAACTCAAAAAAAA(5' tail) GCCCGACC(5' stem) AGAA(loop) GGCCGGGC(3' stem) GCTTTTCTTGGCAAT(3' tail). Confidence: 100. opp_overlap 444691 444690 444689

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685