Motif View

Internal ID 18920976
Source Database TransTermHP TERM 7
Feature Type terminator
Name
Rho-independent transcription terminator TERM 7
Sequence GGACGACTTCGGTCGTCC
Look for more occurrences
Start 11324
End 11341
Strand -
Genomic Context
Replicon Pseudomonas amygdali pv. tabaci str. ATCC 11528 scaffold4.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AGCAGAAATAAAAAA(5' tail) GGACGAC(5' stem) CGAA(loop) GTCGTCC(3' stem) TTTTTGTGGCCAAGC(3' tail). Confidence: 100. opp_overlap 11324

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685