| Internal ID | 18920908 | Source Database | TransTermHP TERM 31 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 31
|
| Sequence |
GAAGGTATCGGCTTCAGAAGCCGATACTTCTC Look for more occurrences |
| Start | 147311 |
| End | 147342 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas amygdali pv. tabaci str. ATCC 11528 scaffold3.1, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AGGCCGCACAAACAA(5' tail) GAGAAGTATCGGCTT(5' stem) CTG(loop) AAGCCGATACCT-TC(3' stem) TTCTGAATCAATACC(3' tail). Confidence: 90. gap 1, opp_overlap 147313 147315 147316, overlap 147316 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|