| Internal ID | 18920907 | Source Database | TransTermHP TERM 30 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 30
|
| Sequence |
CCAGTTACGTCGATAATCTCTTTCAAGGTTATCGGCGTACTGG Look for more occurrences |
| Start | 145668 |
| End | 145710 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas amygdali pv. tabaci str. ATCC 11528 scaffold3.1, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AGTCCGTCGTTCCCG(5' tail) CCAGTTACGTCGATAATCT(5' stem) CTTTCA(loop) AGGTTATCGGCGT-ACTGG(3' stem) TTTTTTGCGTTCGTC(3' tail). Confidence: 100. gap 1 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|