Motif View

Internal ID 18915509
Source Database TransTermHP TERM 65
Feature Type terminator
Name
Rho-independent transcription terminator TERM 65
Sequence CAGGGCGGACCTTCGGGTTGCCCTG
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Start 299285
End 299309
Strand +
Genomic Context
Replicon Pseudomonas alkylphenolia strain KL28, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCAGTCACTGCAAG(5' tail) CAGGGCGGACC(5' stem) TTC(loop) GGGTTGCCCTG(3' stem) TTTTTGCGTGTGCCG(3' tail). Confidence: 91. opp_overlap 299287

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685