Motif View

Internal ID 18914641
Source Database TransTermHP TERM 260
Feature Type terminator
Name
Rho-independent transcription terminator TERM 260
Sequence CGCCGCACGCGGGAAGCCCTGGTCCTTGCCTTCCCGCGTGCGGCG
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Start 830936
End 830980
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain F9676, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCGGCCGAACGATAA(5' tail) CGCCGCACGCGGGAAGGCAAG(5' stem) GAC(loop) CAGGGCTTCCCGCGTGCGGCG(3' stem) CAGCGATCAGTCCAG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685